ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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I1K1M6_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/I1K1M6_F1_nD1

I1K1M6_F1_nD1

UID: 003323923

AlphaFold

Range: 246-485
UniProt: I1K1M6 (all domains)
Gene: LOC100793939

Protein: tRNA pseudouridine(55) synthase (EC 5.4.99.25)

3D Structure

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Related Domains

Browse other domains in TruB_N,TruB_C_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupPseudouridine synthase(304.102)

TT-groupPseudouridine synthase(304.102.1)

FFamilyTruB_N,TruB_C_2(304.102.1.6)

Pfam Families

TruB family pseudouridylate synthase (N terminal domain)

ClanCL0649PseudoU_synth

PF16198TruB_C_2

tRNA pseudouridylate synthase B C-terminal domain

ClanCL0649PseudoU_synth

External Links

UniProt: I1K1M6

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