ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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I1NB87_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/I1NB87_F1_nD3

I1NB87_F1_nD3

UID: 003326606

AlphaFold

Range: 551-660
AlphaFold: AF-I1NB87
UniProt: I1NB87 (all domains)
Gene: LOC100814134

Protein: Putative GTP diphosphokinase RSH1, chloroplastic (EC 2.7.6.5) (RelA/SpoT homolog 1) (ppGpp synthetase RSH1)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyTGS(221.1.1.16)

Pfam Families

TGS domain

ClanCL0072Ubiquitin

External Links

AlphaFold DB: I1NB87 UniProt: I1NB87

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 551-660