ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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I1JS41_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/I1JS41_F1_nD3

I1JS41_F1_nD3

UID: 003330361

AlphaFold

Range: 111-485,506-744
AlphaFold: AF-I1JS41
UniProt: I1JS41 (all domains)
Gene: GLYMA_03G261100

Protein: Conserved oligomeric Golgi complex subunit 4 (Component of oligomeric Golgi complex 4)

3D Structure

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Related Domains

Browse other domains in COG4_m, COG4_C, COG4_N →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyCOG4_m, COG4_C, COG4_N(109.4.1.1340)

Pfam Families

COG4 transport protein, middle alpha-helical bundle

ClanCL0020TPR

Conserved oligomeric Golgi complex subunit 4, C-terminal

ClanCL0020TPR

Conserved oligomeric Golgi complex subunit 4, N-terminal

ClanCL0020TPR

External Links

AlphaFold DB: I1JS41 UniProt: I1JS41

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 111-485,506-744