ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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I1MDD1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/I1MDD1_F1_nD1

I1MDD1_F1_nD1

UID: 003335692

AlphaFold

Range: 6-40
AlphaFold: AF-I1MDD1
UniProt: I1MDD1 (all domains)
Gene: LOC100784822

Protein: RING-type E3 ubiquitin transferase (EC 2.3.2.27)

3D Structure

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Related Domains

Browse other domains in zinc_ribbon_9 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyzinc_ribbon_9(375.1.1.51)

Pfam Families

PF14369Zn_ribbon_19

zinc-ribbon

ClanCL0167Zn_Beta_Ribbon

External Links

AlphaFold DB: I1MDD1 UniProt: I1MDD1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-40