ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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I1JYB3_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/I1JYB3_F1_nD2

I1JYB3_F1_nD2

UID: 003337488

AlphaFold

Range: 196-290,326-350
AlphaFold: AF-I1JYB3
UniProt: I1JYB3 (all domains)
Gene: GLYMA_04G221900

Protein: S1 motif domain-containing protein

3D Structure

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Related Domains

Browse other domains in Rrp44_CSD1 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyRrp44_CSD1(2.1.1.82)

Pfam Families

PF17216Rrp44_CSD1

Rrp44-like cold shock domain

ClanCL0021OB

External Links

AlphaFold DB: I1JYB3 UniProt: I1JYB3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 196-290,326-350