ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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I1KPQ5_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/I1KPQ5_F1_nD4

I1KPQ5_F1_nD4

UID: 003338076

AlphaFold

Range: 531-595,706-775
AlphaFold: AF-I1KPQ5
UniProt: I1KPQ5 (all domains)
Gene: LOC100785694

Protein: RNA helicase (EC 3.6.4.13)

3D Structure

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Related Domains

Browse other domains in Mtr4-like, beta-barrel domain / Exosome RNA helicase MTR4-like, stalk →

Classification

AArchitectureextended segments(a.20)

XX-groupHelical arch in Ski2-like helicases(3324)

HH-groupHelical arch in Ski2-like helicases(3324.1)

TT-groupHelical arch in Ski2-like helicases(3324.1.1)

FFamilyMtr4-like, beta-barrel domain / Exosome RNA helicase MTR4-like, stalk(3324.1.1.2)

Pfam Families

PF13234MTR4_beta-barrel

Mtr4-like, beta-barrel domain

ClanCL0010SH3

PF21408MTR4-like_stalk

Exosome RNA helicase MTR4-like, stalk

External Links

AlphaFold DB: I1KPQ5 UniProt: I1KPQ5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 531-595,706-775