ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2panB2 - ECOD Domain | ECOD

ECOD/Domains/e2panB2

e2panB2

UID: 000334044

PDB

Range: B:2-184
PDB: 2PAN chain B(all domains)
UniProt: P0AEP7 (all domains)
Gene: gcl

Molecule: Glyoxylate carboligase

3D Structure

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Related Domains

Browse other domains in TPP_enzyme_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThiamin diphosphate-binding fold (THDP-binding)(7574)

HH-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1)

TT-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1.1)

FFamilyTPP_enzyme_N(7574.1.1.7)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
Magnesium ionMG
metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from .

Pfam Families

PF02776TPP_enzyme_N

Thiamine pyrophosphate enzyme, N-terminal TPP binding domain

ClanCL0254THDP-binding

External Links

ECOD PDB View: 2PAN RCSB PDB: 2PAN PDBe: 2PAN UniProt: P0AEP7

Downloads

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