ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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I1NGB5_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/I1NGB5_F1_nD2

I1NGB5_F1_nD2

UID: 003341566

AlphaFold

Range: 41-145,226-340
AlphaFold: AF-I1NGB5
UniProt: I1NGB5 (all domains)
Gene: LOC100794805

Protein: RNA methyltransferase

3D Structure

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Related Domains

Browse other domains in Methyltrn_RNA_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupalpha/beta knot(2488)

HH-groupalpha/beta knot(2488.1)

TT-groupalpha/beta knot(2488.1.1)

FFamilyMethyltrn_RNA_3(2488.1.1.6)

Pfam Families

PF02598Methyltrn_RNA_3

Putative RNA methyltransferase

ClanCL0098SPOUT

External Links

AlphaFold DB: I1NGB5 UniProt: I1NGB5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 41-145,226-340