ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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I1K9M3_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/I1K9M3_F1_nD2

I1K9M3_F1_nD2

UID: 003348814

AlphaFold

Range: 331-440
AlphaFold: AF-I1K9M3
UniProt: I1K9M3 (all domains)
Gene: LOC100814721

Protein: rhamnogalacturonan endolyase (EC 4.2.2.23)

3D Structure

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Related Domains

Browse other domains in fn3_3 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupPrealbumin-like(11.1.4)

FFamilyfn3_3(11.1.4.27)

Pfam Families

Polysaccharide lyase family 4, domain II

ClanCL0287Transthyretin

External Links

AlphaFold DB: I1K9M3 UniProt: I1K9M3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 331-440