ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

K7M344_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/K7M344_F1_nD2

K7M344_F1_nD2

UID: 003349766

AlphaFold

Range: 546-635
AlphaFold: AF-K7M344
UniProt: K7M344 (all domains)
Gene: LOC100795370

Protein: Nonsense-mediated mRNA decay factor SMG8

3D Structure

Loading viewer...

Related Domains

Browse other domains in Smg8_Smg9 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupInterferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain(621)

HH-groupInterferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain(621.1)

TT-groupInterferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain(621.1.1)

FFamilySmg8_Smg9(621.1.1.2)

Pfam Families

PF10220Smg8_Smg9

Smg8_Smg9

External Links

AlphaFold DB: K7M344 UniProt: K7M344

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 546-635