ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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I1KDI9_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/I1KDI9_F1_nD1

I1KDI9_F1_nD1

UID: 003354374

AlphaFold

Range: 106-180
AlphaFold: AF-I1KDI9
UniProt: I1KDI9 (all domains)
Gene: GLYMA_06G225800

Protein: Nucleoid-associated protein

3D Structure

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Related Domains

Browse other domains in YbaB_DNA_bd →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRibonuclease PH domain 2-like(245)

HH-groupYbaB(245.2)

TT-groupYbaB(245.2.1)

FFamilyYbaB_DNA_bd(245.2.1.1)

Pfam Families

PF02575YbaB_DNA_bd

YbaB/EbfC DNA-binding family

ClanCL0717YbaB

External Links

AlphaFold DB: I1KDI9 UniProt: I1KDI9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 106-180