ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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I1JMW4_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/I1JMW4_F1_nD1

I1JMW4_F1_nD1

UID: 003355546

AlphaFold

Range: 6-55
AlphaFold: AF-I1JMW4
UniProt: I1JMW4 (all domains)
Gene: LOC100802738

Protein: PHD-type zinc finger plants domain-containing protein

3D Structure

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Related Domains

Browse other domains in PHD_pln →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupFYVE/PHD zinc finger(376.1.3)

FFamilyPHD_pln(376.1.3.59)

Pfam Families

PF25054PHD_pln

PHD-type zinc finger

ClanCL0229RING

External Links

AlphaFold DB: I1JMW4 UniProt: I1JMW4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-55