ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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I1JS05_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/I1JS05_F1_nD4

I1JS05_F1_nD4

UID: 003357560

AlphaFold

Range: 381-475
AlphaFold: AF-I1JS05
UniProt: I1JS05 (all domains)
Gene: LOC100818901

Protein: Uncharacterized protein

3D Structure

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Related Domains

Browse other domains in Retrotran_gag_2 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupRetrovirus capsid protein(170)

HH-groupRetrovirus capsid protein-C(170.1)

TT-groupRetrovirus capsid protein-C(170.1.1)

FFamilyRetrotran_gag_2(170.1.1.15)

Pfam Families

PF14223Retrotran_gag_2

gag-polypeptide of LTR copia-type

ClanCL0523GAG-polyprotein

External Links

AlphaFold DB: I1JS05 UniProt: I1JS05

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 381-475