ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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I1NAV1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/I1NAV1_F1_nD1

I1NAV1_F1_nD1

UID: 003357924

AlphaFold

Range: 6-85,131-235,266-300
AlphaFold: AF-I1NAV1
UniProt: I1NAV1 (all domains)
Gene: LOC100813062

Protein: Trafficking protein particle complex subunit 8

3D Structure

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Related Domains

Browse other domains in TRAPPC-Trs85 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyTRAPPC-Trs85(2004.1.1.325)

Pfam Families

PF12739TRAPPC-Trs85

ER-Golgi trafficking TRAPP I complex 85 kDa subunit

External Links

AlphaFold DB: I1NAV1 UniProt: I1NAV1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-85,131-235,266-300