ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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I1LNQ5_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/I1LNQ5_F1_nD4

I1LNQ5_F1_nD4

UID: 003358255

AlphaFold

Range: 346-430
AlphaFold: AF-I1LNQ5
UniProt: I1LNQ5 (all domains)
Gene: GLYMA_12G003300

Protein: PHD-type domain-containing protein

3D Structure

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Related Domains

Browse other domains in WHD_plant_repro →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyWHD_plant_repro(101.1.2.497)

Pfam Families

PF25874WHD_plant_repro

Winged helix-turn-helix domain in plant reproductive proteins

ClanCL0123HTH

External Links

AlphaFold DB: I1LNQ5 UniProt: I1LNQ5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 346-430