ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3bp9Y1 - ECOD Domain | ECOD

ECOD/Domains/e3bp9Y1

e3bp9Y1

UID: 000335891

PDB

Range: Y:1-131
PDB: 3BP9 chain Y(all domains)
UniProt: P03336 (all domains)
Gene: gag

Molecule: Gag polyprotein (Core polyprotein) [Cleaved into: Matrix protein p15 (MA); RNA-binding phosphoprotein p12 (pp12); Capsid protein p30 (CA); Nucleocapsid protein p10-gag (NC-gag)]

3D Structure

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Related Domains

Browse other domains in Gag_p30 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupRetrovirus capsid protein(170)

HH-groupRetrovirus capsid protein N-terminal domain(170.2)

TT-groupRetrovirus capsid protein N-terminal domain(170.2.1)

FFamilyGag_p30(170.2.1.2)

Pfam Families

PF02093Gag_p30

Gag P30 core shell protein

ClanCL0148Viral_Gag

External Links

ECOD PDB View: 3BP9 RCSB PDB: 3BP9 PDBe: 3BP9 UniProt: P03336

Downloads

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