ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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I1M0C3_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/I1M0C3_F1_nD1

I1M0C3_F1_nD1

UID: 003375186

AlphaFold

Range: 71-220,256-340,366-515,551-685
AlphaFold: AF-I1M0C3
UniProt: I1M0C3 (all domains)
Gene: LOC100793949

Protein: Mediator of RNA polymerase II transcription subunit 16

3D Structure

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Related Domains

Browse other domains in MED16_beta-prop →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyMED16_beta-prop(5.1.4.508)

Pfam Families

PF30952MED16_beta-prop

Mediator complex subunit 16 N-terminal domain

ClanCL0186Beta_propeller

External Links

AlphaFold DB: I1M0C3 UniProt: I1M0C3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 71-220,256-340,366-515,551-685