ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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I1M4L1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/I1M4L1_F1_nD1

I1M4L1_F1_nD1

UID: 003376648

AlphaFold

Range: 81-370,581-600
AlphaFold: AF-I1M4L1
UniProt: I1M4L1 (all domains)
Gene: LOC100801743

Protein: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic (EC 1.17.7.1) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase)

3D Structure

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Related Domains

Browse other domains in GcpE →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGcpE(2002.1.1.132)

Pfam Families

GcpE TIM-barrel domain

ClanCL0036TIM_barrel

External Links

AlphaFold DB: I1M4L1 UniProt: I1M4L1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 81-370,581-600