ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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I1JYI1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/I1JYI1_F1_nD1

I1JYI1_F1_nD1

UID: 003378451

AlphaFold

Range: 66-180
AlphaFold: AF-I1JYI1
UniProt: I1JYI1 (all domains)
Gene: LOC100784915

Protein: Sigma 54 modulation/S30EA ribosomal protein C-terminal domain-containing protein

3D Structure

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Related Domains

Browse other domains in Ribosomal_S30AE →

Classification

AArchitecturea+b two layers(a.11)

XX-groupdsRBD-like(330)

HH-groupRibosome binding protein Y (YfiA homologue)(330.2)

TT-groupRibosome binding protein Y (YfiA homologue)(330.2.1)

FFamilyRibosomal_S30AE(330.2.1.1)

Pfam Families

PF02482Ribosomal_S30AE

Sigma 54 modulation protein / S30EA ribosomal protein

ClanCL0219RNase_H

External Links

AlphaFold DB: I1JYI1 UniProt: I1JYI1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 66-180