ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

K7LVL9_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/K7LVL9_F1_nD1

K7LVL9_F1_nD1

UID: 003381466

AlphaFold

Range: 46-194,236-265,311-430,466-490,526-540
AlphaFold: AF-K7LVL9
UniProt: K7LVL9 (all domains)
Gene: LOC100788114

Protein: Nonsense-mediated mRNA decay factor SMG8

3D Structure

Loading viewer...

Related Domains

Browse other domains in Smg8_Smg9 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilySmg8_Smg9(2004.1.1.171)

Pfam Families

PF10220Smg8_Smg9

Smg8_Smg9

External Links

AlphaFold DB: K7LVL9 UniProt: K7LVL9

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 46-194,236-265,311-430,466-490,526-540