ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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I1J9F3_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/I1J9F3_F1_nD2

I1J9F3_F1_nD2

UID: 003381711

AlphaFold

Range: 111-190,241-265
AlphaFold: AF-I1J9F3
UniProt: I1J9F3 (all domains)
Gene: LOC778165

Protein: MYB transcription factor

3D Structure

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Related Domains

Browse other domains in Linker_histone →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyLinker_histone(101.1.2.10)

Pfam Families

PF00538Linker_histone

linker histone H1 and H5 family

ClanCL0123HTH

External Links

AlphaFold DB: I1J9F3 UniProt: I1J9F3

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 111-190,241-265