ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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I1KJX9_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/I1KJX9_F1_nD1

I1KJX9_F1_nD1

UID: 003383223

AlphaFold

Range: 1-55
AlphaFold: AF-I1KJX9
UniProt: I1KJX9 (all domains)
Gene: LOC100527062

Protein: DNA-directed RNA polymerase subunit

3D Structure

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Related Domains

Browse other domains in Nudix_N_2 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyNudix_N_2(375.1.1.53)

Pfam Families

PF14803Zn_ribbon_Nudix

Nudix N-terminal

ClanCL0167Zn_Beta_Ribbon

External Links

AlphaFold DB: I1KJX9 UniProt: I1KJX9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-55