ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q0P9K4_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q0P9K4_F1_nD1

Q0P9K4_F1_nD1

UID: 003385688

AlphaFold

Range: 1-170,286-365
AlphaFold: AF-Q0P9K4
UniProt: Q0P9K4 (all domains)
Gene: dapE

Protein: Succinyl-diaminopimelate desuccinylase (SDAP desuccinylase) (EC 3.5.1.18) (N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase)

3D Structure

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Related Domains

Browse other domains in Peptidase_M20 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPhosphorylase/hydrolase-like(2011)

HH-groupZn-dependent exopeptidases(2011.1)

TT-groupZn-dependent exopeptidases(2011.1.1)

FFamilyPeptidase_M20(2011.1.1.6)

Pfam Families

PF01546Peptidase_M20

Peptidase family M20/M25/M40

ClanCL0865ZnExoPePases

External Links

AlphaFold DB: Q0P9K4 UniProt: Q0P9K4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-170,286-365