ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q0PAK4_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q0PAK4_F1_nD2

Q0PAK4_F1_nD2

UID: 003387034

AlphaFold

Range: 81-210
UniProt: Q0PAK4 (all domains)
Gene: rpoN

Protein: RNA polymerase sigma-54 factor

3D Structure

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Related Domains

Browse other domains in Sigma54_CBD →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupSigma54 core-binding domain(101.1.20)

FFamilySigma54_CBD(101.1.20.1)

Pfam Families

PF04963Sigma54_CBD

Sigma-54 factor, core binding domain

ClanCL0123HTH

External Links

UniProt: Q0PAK4

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