ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9PM80_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q9PM80_F1_nD1

Q9PM80_F1_nD1

UID: 003387754

AlphaFold

Range: 51-170
AlphaFold: AF-Q9PM80
UniProt: Q9PM80 (all domains)
Gene: rpoA

Protein: DNA-directed RNA polymerase subunit alpha (RNAP subunit alpha) (EC 2.7.7.6) (RNA polymerase subunit alpha) (Transcriptase subunit alpha)

3D Structure

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Related Domains

Browse other domains in RNA_pol_A_bac →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupRibosomal protein TL5/L25 C-terminal domain-like(240)

HH-groupInsert subdomain of RNA polymerase alpha subunit(240.2)

TT-groupInsert subdomain of RNA polymerase alpha subunit(240.2.1)

FFamilyRNA_pol_A_bac(240.2.1.1)

Pfam Families

PF01000RNA_pol_A_bac

RNA polymerase Rpb3/RpoA insert domain

External Links

AlphaFold DB: Q9PM80 UniProt: Q9PM80

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 51-170