ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q0PC46_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q0PC46_F1_nD1

Q0PC46_F1_nD1

UID: 003387833

AlphaFold

Range: 46-205
AlphaFold: AF-Q0PC46
UniProt: Q0PC46 (all domains)
Gene: Cj0091

Protein: Penicillin-binding protein activator LpoB

3D Structure

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Related Domains

Browse other domains in LpoB →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupTolB, N-terminal domain(7503)

HH-groupTolB, N-terminal domain(7503.1)

TT-groupTolB, N-terminal domain(7503.1.1)

FFamilyLpoB(7503.1.1.7)

Pfam Families

Peptidoglycan-synthase activator LpoB

ClanCL0342TolB_N

External Links

AlphaFold DB: Q0PC46 UniProt: Q0PC46

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 46-205