ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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E8NHA2_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/E8NHA2_F1_nD1

E8NHA2_F1_nD1

UID: 003389281

AlphaFold

Range: 6-410
AlphaFold: AF-E8NHA2
UniProt: E8NHA2 (all domains)
Gene: Herc4

Protein: HECT and RLD domain containing E3 ubiquitin ligase 4, isoform C (LD13353p)

3D Structure

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Related Domains

Browse other domains in RCC1, RCC1_2, WD40_RLD →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyRCC1, RCC1_2, WD40_RLD(5.1.4.255)

Pfam Families

Regulator of chromosome condensation (RCC1) repeat

ClanCL0186Beta_propeller

Regulator of chromosome condensation (RCC1) repeat

ClanCL0186Beta_propeller

PF25390WD40_RLD

RCC1-like domain

ClanCL0186Beta_propeller

External Links

AlphaFold DB: E8NHA2 UniProt: E8NHA2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-410