ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q9W5B6_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q9W5B6_F1_nD1

Q9W5B6_F1_nD1

UID: 003390138

AlphaFold

Range: 1-220
AlphaFold: AF-Q9W5B6
UniProt: Q9W5B6 (all domains)
Gene: CG3021

Protein: Mitochondrial tRNA-specific 2-thiouridylase 1 (EC 2.8.1.14)

3D Structure

Loading viewer...

Related Domains

Browse other domains in tRNA_Me_trans →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilytRNA_Me_trans(2005.1.1.23)

Pfam Families

PF03054tRNA_Me_trans

tRNA methyl transferase HUP domain

ClanCL0039HUP

External Links

AlphaFold DB: Q9W5B6 UniProt: Q9W5B6

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-220