ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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O16117_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/O16117_F1_nD1

O16117_F1_nD1

UID: 003390170

AlphaFold

Range: 176-240
AlphaFold: AF-O16117
UniProt: O16117 (all domains)
Gene: sv

Protein: Shaven, isoform A (Sparkling protein)

3D Structure

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Related Domains

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Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilyPAX(101.1.1.4)

Pfam Families

'Paired box' domain

ClanCL0123HTH

External Links

AlphaFold DB: O16117 UniProt: O16117

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 176-240