ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P43125_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/P43125_F1_nD4

P43125_F1_nD4

UID: 003390379

AlphaFold

Range: 1056-1215
AlphaFold: AF-P43125
UniProt: P43125 (all domains)
Gene: rdgB

Protein: Protein retinal degeneration B (Probable calcium transporter rdgB)

3D Structure

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Related Domains

Browse other domains in LNS2_PITM1-3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupHAD-like(2006.1.1)

FFamilyLNS2_PITM1-3(2006.1.1.40)

Pfam Families

PF24694LNS2_PITM1-3

PITM 1-3, LNS2 domain

ClanCL0137HAD

External Links

AlphaFold DB: P43125 UniProt: P43125

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1056-1215