ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q8IPX7_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8IPX7_F1_nD1

Q8IPX7_F1_nD1

UID: 003391103

AlphaFold

Range: 6-60
AlphaFold: AF-Q8IPX7
UniProt: Q8IPX7 (all domains)
Gene: Rrp40

Protein: Exosome complex component RRP40 (Ribosomal RNA-processing protein 40)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RRP40_N_mamm →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupalpha/beta-Hammerhead/Barrel-sandwich hybrid(325)

HH-groupalpha/beta-Hammerhead/Barrel-sandwich hybrid(325.1)

TT-groupRibosomal L27 protein(325.1.8)

FFamilyRRP40_N_mamm(325.1.8.4)

Pfam Families

PF21261RRP40_N_mamm

Mammalian exosome complex component RRP40, N-terminal

ClanCL0105Hybrid

External Links

AlphaFold DB: Q8IPX7 UniProt: Q8IPX7

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-60