ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8MSC4_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8MSC4_F1_nD1

Q8MSC4_F1_nD1

UID: 003391140

AlphaFold

Range: 96-195
AlphaFold: AF-Q8MSC4
UniProt: Q8MSC4 (all domains)
Gene: BigH1

Protein: CG3509 protein (CG3509-PA) (Histone H1 variant BigH1) (LD21907p)

3D Structure

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Related Domains

Browse other domains in Linker_histone →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyLinker_histone(101.1.2.10)

Pfam Families

PF00538Linker_histone

linker histone H1 and H5 family

ClanCL0123HTH

External Links

AlphaFold DB: Q8MSC4 UniProt: Q8MSC4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 96-195