ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9VIV2_F1_nD6 - ECOD Domain | ECOD

ECOD/Domains/Q9VIV2_F1_nD6

Q9VIV2_F1_nD6

UID: 003392839

RepresentativeAlphaFold

Range: 921-995
AlphaFold: AF-Q9VIV2
UniProt: Q9VIV2 (all domains)
Gene: swm

Protein: Zinc finger protein swm (Protein second mitotic wave missing)

3D Structure

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Related Domains

Browse other domains in Nup35_RRM_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyNup35_RRM_2(304.9.1.58)

Pfam Families

PF14605Nup35_RRM_2

Nup53/35/40-type RNA recognition motif

ClanCL0221RRM

External Links

AlphaFold DB: Q9VIV2 UniProt: Q9VIV2

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 921-995