ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9VMW9_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q9VMW9_F1_nD1

Q9VMW9_F1_nD1

UID: 003397661

AlphaFold

Range: 36-390
AlphaFold: AF-Q9VMW9
UniProt: Q9VMW9 (all domains)
Gene: Gmd

Protein: GDP-mannose 4,6 dehydratase (EC 4.2.1.47) (GDP-D-mannose dehydratase) (Dm-gmd) (GDP-mannose dehydratase)

3D Structure

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Related Domains

Browse other domains in Polysacc_synt_2, GDP_Man_Dehyd →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyPolysacc_synt_2, GDP_Man_Dehyd(2003.1.1.141)

Pfam Families

PF02719Polysacc_synt_2

Polysaccharide biosynthesis protein

ClanCL0063NADP_Rossmann

PF16363GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

ClanCL0063NADP_Rossmann

External Links

AlphaFold DB: Q9VMW9 UniProt: Q9VMW9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 36-390