ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9VK44_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q9VK44_F1_nD2

Q9VK44_F1_nD2

UID: 003401090

AlphaFold

Range: 1136-1215
AlphaFold: AF-Q9VK44
UniProt: Q9VK44 (all domains)
Gene: Ube4B

Protein: Ubiquitin conjugation factor E4 B (EC 2.3.2.27) (RING-type E3 ubiquitin transferase E4 B) (Ubiquitin fusion degradation protein 2)

3D Structure

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Related Domains

Browse other domains in U-box →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyU-box(376.1.1.8)

Pfam Families

U-box domain

ClanCL0229RING

External Links

AlphaFold DB: Q9VK44 UniProt: Q9VK44

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1136-1215