ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q9VMQ3_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q9VMQ3_F1_nD1

Q9VMQ3_F1_nD1

UID: 003401414

AlphaFold

Range: 26-60
AlphaFold: AF-Q9VMQ3
UniProt: Q9VMQ3 (all domains)
Gene: tomb

Protein: RT06796p1 (Tombola)

3D Structure

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Related Domains

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Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupZn3Cys9 preSET domain-related(3358)

HH-groupZn3Cys9 preSET domain-related(3358.1)

TT-groupZn3Cys9 preSET domain-related(3358.1.1)

FFamilyTCR(3358.1.1.1)

Pfam Families

Tesmin/TSO1-like CXC domain, cysteine-rich domain

ClanCL0809CXC

External Links

AlphaFold DB: Q9VMQ3 UniProt: Q9VMQ3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 26-60