ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9VL28_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q9VL28_F1_nD2

Q9VL28_F1_nD2

UID: 003401548

AlphaFold

Range: 121-220
AlphaFold: AF-Q9VL28
UniProt: Q9VL28 (all domains)
Gene: Snx17

Protein: LD15323p (Sorting nexin 17)

3D Structure

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Related Domains

Browse other domains in SNX17-27-31_F1_FERM →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilySNX17-27-31_F1_FERM(221.1.1.69)

Pfam Families

PF21273SNX17-27-31_F1_FERM

Sortin nexin 17/27/31, FERM domain, F1 lobe

ClanCL0072Ubiquitin

External Links

AlphaFold DB: Q9VL28 UniProt: Q9VL28

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 121-220