ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A1Z9K4_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A1Z9K4_F1_nD2

A1Z9K4_F1_nD2

UID: 003402699

AlphaFold

Range: 46-225,366-375
AlphaFold: AF-A1Z9K4
UniProt: A1Z9K4 (all domains)
Gene: RN-tre

Protein: Related to the N terminus of tre oncogene, isoform A

3D Structure

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Related Domains

Browse other domains in RabGAP-TBC, RabGap-TBC_2 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupYpt/Rab-GAP domain of gyp1p-like(524)

HH-groupYpt/Rab-GAP domain of gyp1p(524.1)

TT-groupYpt/Rab-GAP domain of gyp1p(524.1.1)

FFamilyRabGAP-TBC, RabGap-TBC_2(524.1.1.8)

Pfam Families

PF00566RabGAP-TBC

Rab-GTPase-TBC domain

ClanCL0816TBC-like

PF23436RabGap-TBC_2

RabGAP TBC domain

ClanCL0816TBC-like

External Links

AlphaFold DB: A1Z9K4 UniProt: A1Z9K4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 46-225,366-375