ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q95SP2_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q95SP2_F1_nD2

Q95SP2_F1_nD2

UID: 003404368

AlphaFold

Range: 41-270
AlphaFold: AF-Q95SP2
UniProt: Q95SP2 (all domains)
Gene: sip3

Protein: E3 ubiquitin-protein ligase HRD1 (EC 2.3.2.27) (RING-type E3 ubiquitin transferase HRD1) (Septin-interacting protein 3) (Synoviolin)

3D Structure

Loading viewer...

Related Domains

Browse other domains in TPR_SYVN1_N →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyTPR_SYVN1_N(109.4.1.1375)

Pfam Families

PF25563TPR_SYVN1_N

E3 ubiquitin-protein ligase synoviolin-like, TPR repeats

ClanCL0020TPR

External Links

AlphaFold DB: Q95SP2 UniProt: Q95SP2

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 41-270