ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9VRJ9_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q9VRJ9_F1_nD2

Q9VRJ9_F1_nD2

UID: 003404631

AlphaFold

Range: 146-305
AlphaFold: AF-Q9VRJ9
UniProt: Q9VRJ9 (all domains)
Gene: Yod1

Protein: Ubiquitin thioesterase Otu1 (EC 3.4.19.12) (Yod1 deubiquitinase)

3D Structure

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Related Domains

Browse other domains in OTU →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyOTU(219.1.1.15)

Pfam Families

OTU-like cysteine protease

ClanCL0125Peptidase_CA

External Links

AlphaFold DB: Q9VRJ9 UniProt: Q9VRJ9

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 146-305