ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9VCG4_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q9VCG4_F1_nD2

Q9VCG4_F1_nD2

UID: 003405428

AlphaFold

Range: 6-15,86-100,276-370,456-575
AlphaFold: AF-Q9VCG4
UniProt: Q9VCG4 (all domains)
Gene: Ndc1

Protein: Nucleoporin Ndc1

3D Structure

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Related Domains

Browse other domains in Ndc1_Nup →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyNdc1_Nup(109.4.1.504)

Pfam Families

PF09531Ndc1_Nup

Nucleoporin protein Ndc1-Nup

External Links

AlphaFold DB: Q9VCG4 UniProt: Q9VCG4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-15,86-100,276-370,456-575