ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q9VC93_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/Q9VC93_F1_nD5

Q9VC93_F1_nD5

UID: 003406047

AlphaFold

Range: 851-955
AlphaFold: AF-Q9VC93
UniProt: Q9VC93 (all domains)
Gene: Dis3

Protein: Exosome complex exonuclease RRP44 (Protein DIS3 homolog) (Ribosomal RNA-processing protein 44)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Rrp44_S1 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyRrp44_S1(2.1.1.81)

Pfam Families

PF17215Rrp44_S1

S1 domain

ClanCL0021OB

External Links

AlphaFold DB: Q9VC93 UniProt: Q9VC93

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 851-955