ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q9W0B8_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/Q9W0B8_F1_nD5

Q9W0B8_F1_nD5

UID: 003407730

AlphaFold

Range: 1171-1234
AlphaFold: AF-Q9W0B8
UniProt: Q9W0B8 (all domains)
Gene: alphaCOP

Protein: Coatomer subunit alpha

3D Structure

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Related Domains

Browse other domains in COPI_C →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyCOPI_C(376.1.1.11)

Pfam Families

Coatomer (COPI) alpha subunit C-terminus

ClanCL0020TPR

External Links

AlphaFold DB: Q9W0B8 UniProt: Q9W0B8

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1171-1234