ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9VZ08_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/Q9VZ08_F1_nD5

Q9VZ08_F1_nD5

UID: 003408346

AlphaFold

Range: 1491-1565
AlphaFold: AF-Q9VZ08
UniProt: Q9VZ08 (all domains)
Gene: Gapvd1

Protein: GTPase-activating protein and VPS9 domain-containing protein 1 (Receptor-mediated endocytosis protein 6 homolog)

3D Structure

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Related Domains

Browse other domains in DUF5601 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBromodomain-like(633)

HH-groupRABEX-5 helical domain(633.24)

TT-groupRABEX-5 helical domain(633.24.1)

FFamilyDUF5601(633.24.1.2)

Pfam Families

PF18151DUF5601

Domain of unknown function (DUF5601)

External Links

AlphaFold DB: Q9VZ08 UniProt: Q9VZ08

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1491-1565