ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9VH20_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/Q9VH20_F1_nD4

Q9VH20_F1_nD4

UID: 003412389

AlphaFold

Range: 351-415,446-475,546-560,793-870
AlphaFold: AF-Q9VH20
UniProt: Q9VH20 (all domains)
Gene: TAF1B

Protein: TATA box-binding protein-associated factor RNA polymerase I subunit B (TATA box-binding protein-associated factor 1B) (TBP-associated factor 1B)

3D Structure

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Related Domains

Browse other domains in Rrn7_cyclin_C →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupCyclin-like(101.1.10)

FFamilyRrn7_cyclin_C(101.1.10.33)

Pfam Families

PF20645Rrn7_cyclin_C

Rrn7/TAF1B, C-terminal cyclin domain

ClanCL0065Cyclin

External Links

AlphaFold DB: Q9VH20 UniProt: Q9VH20

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 351-415,446-475,546-560,793-870