ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9VK44_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q9VK44_F1_nD1

Q9VK44_F1_nD1

UID: 003412777

AlphaFold

Range: 66-90,206-260,346-1135
AlphaFold: AF-Q9VK44
UniProt: Q9VK44 (all domains)
Gene: Ube4B

Protein: Ubiquitin conjugation factor E4 B (EC 2.3.2.27) (RING-type E3 ubiquitin transferase E4 B) (Ubiquitin fusion degradation protein 2)

3D Structure

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Related Domains

Browse other domains in Ufd2P_core →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyUfd2P_core(109.4.1.150)

Pfam Families

PF10408Ufd2P_core

Ubiquitin elongating factor core

ClanCL0020TPR

External Links

AlphaFold DB: Q9VK44 UniProt: Q9VK44

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 66-90,206-260,346-1135