ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9V9S0_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q9V9S0_F1_nD2

Q9V9S0_F1_nD2

UID: 003413198

AlphaFold

Range: 286-315
AlphaFold: AF-Q9V9S0
UniProt: Q9V9S0 (all domains)
Gene: Lamp1

Protein: Lysosome-associated membrane glycoprotein 5 (Lysosome-associated membrane protein 5)

3D Structure

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Related Domains

Browse other domains in Lamp2_2nd →

Classification

AArchitectureextended segments(a.20)

XX-groupTransmembrane segment of lysosome-associated membrane glycoprotein 2(6169)

HH-groupTransmembrane segment of lysosome-associated membrane glycoprotein 2(6169.1)

TT-groupTransmembrane segment of lysosome-associated membrane glycoprotein 2(6169.1.1)

FFamilyLamp2_2nd(6169.1.1.6)

Pfam Families

PF21222Lamp2_2nd

Lysosome-associated membrane glycoprotein 2, transmembrane segment

External Links

AlphaFold DB: Q9V9S0 UniProt: Q9V9S0

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 286-315