ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9VDH5_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q9VDH5_F1_nD3

Q9VDH5_F1_nD3

UID: 003413244

AlphaFold

Range: 401-520,746-805
AlphaFold: AF-Q9VDH5
UniProt: Q9VDH5 (all domains)
Gene: KaiR1D

Protein: Glutamate receptor 1

3D Structure

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Related Domains

Browse other domains in Lig_chan-Glu_bd →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyLig_chan-Glu_bd(7523.1.1.20)

Pfam Families

PF10613Lig_chan-Glu_bd

Ligated ion channel L-glutamate- and glycine-binding site

ClanCL0177PBP

External Links

AlphaFold DB: Q9VDH5 UniProt: Q9VDH5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 401-520,746-805