ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9VRC9_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q9VRC9_F1_nD2

Q9VRC9_F1_nD2

UID: 003413368

AlphaFold

Range: 351-590,841-865
AlphaFold: AF-Q9VRC9
UniProt: Q9VRC9 (all domains)
Gene: Npc1b

Protein: NPC intracellular cholesterol transporter 1 homolog 1b (Niemann-Pick type protein homolog 1b)

3D Structure

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Related Domains

Browse other domains in NPC1_MLD →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupFerredoxin domains in multidrug efflux transporter(304.28)

TT-groupMultidrug efflux transporter AcrB pore domain(304.28.1)

FFamilyNPC1_MLD(304.28.1.5)

Pfam Families

PF22314NPC1_MLD

NPC1, middle luminal domain

ClanCL0322RND_permease

External Links

AlphaFold DB: Q9VRC9 UniProt: Q9VRC9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 351-590,841-865