ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9VC93_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q9VC93_F1_nD2

Q9VC93_F1_nD2

UID: 003413718

AlphaFold

Range: 221-305,331-360
AlphaFold: AF-Q9VC93
UniProt: Q9VC93 (all domains)
Gene: Dis3

Protein: Exosome complex exonuclease RRP44 (Protein DIS3 homolog) (Ribosomal RNA-processing protein 44)

3D Structure

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Related Domains

Browse other domains in Rrp44_CSD1 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyRrp44_CSD1(2.1.1.82)

Pfam Families

PF17216Rrp44_CSD1

Rrp44-like cold shock domain

ClanCL0021OB

External Links

AlphaFold DB: Q9VC93 UniProt: Q9VC93

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 221-305,331-360